Publication Classification:

Object Measurement = Motility

Data Axes = X-Y-T

• "Al-Kofahi O, Radke RJ, Goderie SK, Shen Q, Temple S, Roysam B: Automated cell lineage construction: a rapid method to analyze clonal development established with murine neural progenitor cells. Cell Cycle 2006, 5:327–35."

• "Bahnson A, Athanassiou C, Koebler D, Qian L, Shun T, Shields D, Yu H, Wang H, Goff J, Cheng T, Houck R, Cowsert L: Automated measurement of cell motility and proliferation. BMC Cell Biol 2005, 6:19."

• "Bai W, Zhou X, Zhu J, Ji L, Wong STC: Tracking of migrating Glioma cells in feature space. In 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. IEEE; 2007:272–275."

• "Bise R, Li K, Eom S: Reliably tracking partially overlapping neural stem cells in dic microscopy image sequences. In MICCAI Workshop on Optical Tissue Image analysis in Microscopy, Histopathology and Endoscopy. Imperial College London; 2009:67–77."

• "Chowdhury S, Ruusuvuori P, Liberali P: Automated cell tracking and cell lineage construction with improved performance. In Proceedings of the Sixth International Workshop on Computational Systems Biology (WCSB). Edited by Manninen T et al. Aarhus, Denmark; 2009:2–5."

• "Debeir O, Camby I, Kiss R, Van Ham P, Decaestecker C: A model-based approach for automated in vitro cell tracking and chemotaxis analyses. Cytometry A 2004, 60:29–40."

• "Dzyubachyk O, Van Cappellen WA, Essers J, Niessen WJ, Meijering E: Advanced level-set-based cell tracking in time-lapse fluorescence microscopy. IEEE Trans Med Imaging 2010, 29:852–867."

• "Hadjidemetriou S, Gabrielli B, Mele K, Vallotton P: Detection and tracking of cell divisions in phase contrast video microscopy. In Proc. of the Third MICCAI Worshop on Microscopic Image Analysis with Applications in Biology. New York, NY, USA: MICCAI; 2008."

• "Hand AJ, Sun T, Barber DC, Hose DR, MacNeil S: Automated tracking of migrating cells in phase-contrast video microscopy sequences using image registration. J Microsc 2009, 234:62–79."

• "Held M, Schmitz MH a, Fischer B, Walter T, Neumann B, Olma MH, Peter M, Ellenberg J, Gerlich DW: CellCognition: time-resolved phenotype annotation in high-throughput live cell imaging. Nat. Methods 2010, 7:747–54."

• "Huh S, Eom S, Bise R, Yin Z, Kanade T: Mitosis detection for stem cell tracking in phase-contrast microscopy images. In Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on. IEEE; 2011:2121–2127."

• "Huth J, Buchholz M, Kraus JM, Schmucker M, von Wichert G, Krndija D, Seufferlein T, Gress TM, Kestler H a: Significantly improved precision of cell migration analysis in time-lapse video microscopy through use of a fully automated tracking system. BMC Cell Biol 2010, 11:24."

• "Kachouie NN, Fieguth P, Ramunas J, Jervis E: A Statistical Thresholding Method for Cell Tracking. 2006 IEEE Int Inf Technol 2006:222–227."

• "Law YN, Lee HK, Yip AM: Learning Dynamical Shape Prior for Level Set based Cell Tracking. Ann. Br. Mach. Vis. Assoc. 2013, 2013:1–14."

• "Law YN: Cell tracking using phase-adaptive shape prior. J. Microsc. 2013, 252:149–58."

• "Li K, Miller ED, Chen M, Kanade T, Weiss LE, Campbell PG: Cell population tracking and lineage construction with spatiotemporal context. Med Image Anal 2008, 12:546–66."

• "Li K, Miller ED, Weiss LE: Online tracking of migrating and proliferating cells imaged with phase-contrast microscopy. In Proceedings of the 2006 Conference on Computer Vision and Pattern Recognition Workshop. IEEE Computer Society; 2006:8."

• "Mange R, de Heras Ciechomski P, Swartz M: seeCell: Visualization and tracking dedicated to cell analysis. 2008 Int Conf Innov Inf Technol 2008:707–711."

• "Moeller M, Burger M, Dieterich P, Schwab A: A Framework for Automated Cell Tracking in Phase Contrast Microscopic Videos based on Normal Velocities. J Vis Commun Image Represent 2014, 25:396–409."

• "Padfield D, Rittscher J, Roysam B: Spatio-temporal cell segmentation and tracking for automated screening. In Processings on the 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro; 2008:376–379."

• "Padfield DR, Rittscher J, Sebastian T, Thomas N, Roysam B: Spatio-Temporal Cell Cycle Analysis Using 3D Level Set Segmentation of Unstained Nuclei in Line Scan Confocal Fluorescence Images. 3rd IEEE Int Symp Biomed Imaging Macro to Nano, 2006 :1036–1039."

• "Wang Q, Niemi J, Tan C-M, You L, West M: Image segmentation and dynamic lineage analysis in single-cell fluorescence microscopy. Cytometry A 2010, 77:101–10."

• "Yin Z, Kanade T, Chen M: Understanding the phase contrast optics to restore artifact-free microscopy images for segmentation. Med Image Anal 2012, 16:1047–62."

• "Yin Z, Li K, Kanade T, Chen M: Understanding the Optics to Aid Microscopy Image Segmentation. In Medical Image Computing and Computer-Assisted Intervention--MICCAI 2010. Volume 13. Heidelberg: Springer; 2010:209–217."

Survey publication disclaimer:

The National Institute of Standards and Technology (NIST) uses substantial efforts to select publications that meet the publication survey criteria. However, NIST makes no warranties that the survey is exhaustive. The survey and its contents are provided by NIST as a public service and are strictly provided "AS IS" with no warranties of any type. Furthermore, NIST does not make any statements about quality of publications by including them in the survey classification and does not imply any recommendation or endorsement.