National Institute of Standards and Technology

Publication Classification:

Segmentation Method = Active contours + Level Set

Data Axes = X-Y-T

  • "Bahnson A, Athanassiou C, Koebler D, Qian L, Shun T, Shields D, Yu H, Wang H, Goff J, Cheng T, Houck R, Cowsert L: Automated measurement of cell motility and proliferation. BMC Cell Biol 2005, 6:19."
  • "Chowdhury S, Ruusuvuori P, Liberali P: Automated cell tracking and cell lineage construction with improved performance. In Proceedings of the Sixth International Workshop on Computational Systems Biology (WCSB). Edited by Manninen T et al. Aarhus, Denmark; 2009:2–5."
  • "Debeir O, Camby I, Kiss R, Van Ham P, Decaestecker C: A model-based approach for automated in vitro cell tracking and chemotaxis analyses. Cytometry A 2004, 60:29–40."
  • "Dzyubachyk O, Van Cappellen WA, Essers J, Niessen WJ, Meijering E: Advanced level-set-based cell tracking in time-lapse fluorescence microscopy. IEEE Trans Med Imaging 2010, 29:852–867."
  • "Law YN, Lee HK, Yip AM: Learning Dynamical Shape Prior for Level Set based Cell Tracking. Ann. Br. Mach. Vis. Assoc. 2013, 2013:1–14."
  • "Law YN: Cell tracking using phase-adaptive shape prior. J. Microsc. 2013, 252:149–58."
  • "Li K, Miller ED, Chen M, Kanade T, Weiss LE, Campbell PG: Cell population tracking and lineage construction with spatiotemporal context. Med Image Anal 2008, 12:546–66."
  • "Mange R, de Heras Ciechomski P, Swartz M: seeCell: Visualization and tracking dedicated to cell analysis. 2008 Int Conf Innov Inf Technol 2008:707–711."
  • "Moeller M, Burger M, Dieterich P, Schwab A: A Framework for Automated Cell Tracking in Phase Contrast Microscopic Videos based on Normal Velocities. J Vis Commun Image Represent 2014, 25:396–409."
  • "Padfield DR, Rittscher J, Sebastian T, Thomas N, Roysam B: Spatio-Temporal Cell Cycle Analysis Using 3D Level Set Segmentation of Unstained Nuclei in Line Scan Confocal Fluorescence Images. 3rd IEEE Int Symp Biomed Imaging Macro to Nano, 2006 :1036–1039."
  • "Yu W, Lee HK, Hariharan S, Bu W, Ahmed S: Evolving generalized Voronoi diagrams for accurate cellular image segmentation. Cytometry. A 2010, 77:379–86."



Survey publication disclaimer:

The National Institute of Standards and Technology (NIST) uses substantial efforts to select publications that meet the publication survey criteria. However, NIST makes no warranties that the survey is exhaustive. The survey and its contents are provided by NIST as a public service and are strictly provided "AS IS" with no warranties of any type. Furthermore, NIST does not make any statements about quality of publications by including them in the survey classification and does not imply any recommendation or endorsement.
Date created: April 10, 2014 | Last updated: